Cell Lines For Studying Ubiquitin-Conjugating Enzymes

What is Ubiquitin?

Definition: Ubiquitin is a small regulatory protein found in the majority of eukaryotic tissues and is added to lysine residues of proteins as a post-translational modification.

The addition of ubiquitin can impact on protein regulation in a number of ways including degradation, cellular localisation, protein interactions and activity.  These modifications can have diverse effects on a number of major cellular processes such as apoptosis, cell cycle, immune regulation and DNA transcription and repair amongst many others. UBiquitinConjugatingEnzymes
Ubiquitin is attached to lysine residues in the target protein by a series of 3 main reactions:
  • Activation, performed by ubiquitin activating enzymes or E1’s
  • Conjugation, performed by ubiquitin-conjugating enzymes or E2’s
  • Ligation, performed by ubiquitin-ligases or E3’s

The manner in which ubiquitin is added determines the outcome for the protein.  These modifications can include:

  • Monubiquitination, the addition of a single ubiquitin to one lysine residue in the protein
  • Multi-monoubiquitination, the addition of single ubiquitin molecules to multiple lysine residues in the target protein
  • Polyubiquitination, the addition of multiple ubiquitin residues to a single lysine residue in the protein in the form of a chain which can take a number of different conformations.

These modifications alter cellular process in different ways.  For example, monubiquitination can impact on membrane trafficking; however, some forms of polyubquitination can result in a protein being targeted for degradation via the proteasome. The ubiquitin pathway has been implicated in a number of genetic disorders and diseases including cancer and neurological diseases which result from the build-up of protein aggregates such as; Alzheimer’s disease, Parkinson’s disease and Huntingdon’s disease.  

Examples of popular knockout cell lines
UBE2A UBE2E1 UBE2H UBE2Q1
UBE2B UBE2E2 UBE2J1 UBE2W
UBE2C UBE2E3 UBE2J2 UBE2Z
UBE2D1 UBE2F UBE2K  
UBE2D2 UBE2G1 UBE2L6  
UBE2D4 UBE2G2 UBE2O  

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